ENSDARG00000028096


Danio rerio

Features
Gene ID: ENSDARG00000028096
  
Biological name :si:ch211-95j8.2
  
Synonyms : si:ch211-95j8.2
  
Possible biological names infered from orthology : claudin 23 / CLDN23 / Q96B33 / Q9D7D7
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 15046837
Gene end: 15048781
  
Corresponding Affymetrix probe sets: Dr.6572.1.A1_at (Zebrafish Array)   XM_001337411_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000030329
Ensembl peptide - ENSDARP00000129015
NCBI entrez gene - 553515     See in Manteia.
RefSeq - XM_001337411
swissprot - F1Q6Q0
swissprot - X1WFL1
ZFIN ID - ZDB-GENE-091204-28
Ensembl - ENSDARG00000028096
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLDN23ENSGALG00000042123Gallus gallus
 CLDN23ENSG00000253958Homo sapiens
 Cldn23ENSMUSG00000055976Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLDN23 / si:ch211-95j8.5 / Q96B33* / Q9D7D7* / claudin 23*ENSDARG0000010370338
si:dkey-221l4.11 / CLDN23* / Q96B33* / Q9D7D7* / claudin 23*ENSDARG0000008955319


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR006187  Claudin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr