ENSDARG00000028715


Danio rerio

Features
Gene ID: ENSDARG00000028715
  
Biological name :mindy3
  
Synonyms : A0AUR5 / mindy3 / MINDY lysine 48 deubiquitinase 3
  
Possible biological names infered from orthology : Mus musculus MINDY lysine 48 deubiquitinase 3 (Mindy3), transcript variant 5, mRNA. / Q9CV28 / Q9H8M7
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 28270037
Gene end: 28371330
  
Corresponding Affymetrix probe sets: Dr.15052.1.S1_at (Zebrafish Array)   Dr.3675.1.A1_at (Zebrafish Array)   NM_001077756_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000059034
NCBI entrez gene - 777708     See in Manteia.
RefSeq - NM_001077756
RefSeq Peptide - NP_001071224
swissprot - A0AUR5
ZFIN ID - ZDB-GENE-061110-13
Ensembl - ENSDARG00000028715
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MINDY3ENSGALG00000008739Gallus gallus
 MINDY3ENSG00000148481Homo sapiens
 Mindy3ENSMUSG00000026767Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-30h22.11 / MINDY4* / Q3UQI9* / Q4G0A6* / MINDY lysine 48 deubiquitinase 4* / Probable ubiquitin carboxyl-terminal hydrolase MINDY-4 *ENSDARG0000007769620
mindy4b / MINDY family member 4BENSDARG0000011233720


Protein motifs (from Interpro)
Interpro ID Name
 IPR011992  EF-hand domain pair
 IPR025257  Domain of unknown function DUF4205


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006915 apoptotic process IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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