ENSDARG00000029157


Danio rerio

Features
Gene ID: ENSDARG00000029157
  
Biological name :med23
  
Synonyms : med23 / mediator complex subunit 23 / Q5RIW8
  
Possible biological names infered from orthology : Q9ULK4
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 2499622
Gene end: 2584115
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119918
Ensembl peptide - ENSDARP00000116237
NCBI entrez gene - 445483     See in Manteia.
RefSeq - XM_005160335
RefSeq - XM_005160334
RefSeq - NM_001003990
RefSeq - XM_021468405
RefSeq Peptide - NP_001003990
swissprot - Q5RIW8
swissprot - B8A4G4
ZFIN ID - ZDB-GENE-040724-82
Ensembl - ENSDARG00000029157
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MED23ENSGALG00000040607Gallus gallus
 MED23ENSG00000112282Homo sapiens
 Med23ENSMUSG00000019984Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR021629  Mediator complex, subunit Med23


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0043473 pigmentation IMP
 biological_processGO:0050768 negative regulation of neurogenesis IMP
 biological_processGO:0072358 cardiovascular system development IMP
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain increased amount , abnormal
brain decreased amount , abnormal
Show

 ZFA:0000010 cardiovascular system cardiovascular system hypertrophic , abnormal
Show

 ZFA:0000029 hindbrain hindbrain increased amount , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000075 spinal cord spinal cord increased amount , abnormal
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 ZFA:0000114 heart heart decreased functionality , abnormal
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 ZFA:0001094 whole organism whole organism decreased length , abnormal
whole organism decreased amount , abnormal
whole organism viability , abnormal
whole organism dead , abnormal
whole organism decreased pigmentation , abnormal
whole organism Melanin decreased amount , abnormal
Show

 ZFA:0001117 post-vent region post-vent region curved ventral , abnormal
Show

 ZFA:0009091 melanocyte melanocyte decreased size , abnormal
melanocyte decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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