ENSDARG00000029671


Danio rerio

Features
Gene ID: ENSDARG00000029671
  
Biological name :xpr1b
  
Synonyms : A8DZH4 / xenotropic and polytropic retrovirus receptor 1b / xpr1b
  
Possible biological names infered from orthology : Q9UBH6 / Q9Z0U0 / xenotropic and polytropic retrovirus receptor 1 / XPR1
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 6999369
Gene end: 7057330
  
Corresponding Affymetrix probe sets: Dr.23948.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000050596
NCBI entrez gene - 558034     See in Manteia.
RefSeq - NM_001126390
RefSeq Peptide - NP_001119862
swissprot - A8DZH4
ZFIN ID - ZDB-GENE-060503-266
Ensembl - ENSDARG00000029671
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 XPR1ENSGALG00000003893Gallus gallus
 XPR1ENSG00000143324Homo sapiens
 Xpr1ENSMUSG00000026469Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
xpr1a / xenotropic and polytropic retrovirus receptor 1a / XPR1* / Q9UBH6* / Q9Z0U0* / xenotropic and polytropic retrovirus receptor 1*ENSDARG0000006244981


Protein motifs (from Interpro)
Interpro ID Name
 IPR004331  SPX domain
 IPR004342  EXS, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IMP
 biological_processGO:0014004 microglia differentiation IMP
 biological_processGO:0030225 macrophage differentiation IMP
 biological_processGO:0030643 cellular phosphate ion homeostasis ISS
 biological_processGO:0035435 phosphate ion transmembrane transport ISS
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031226 intrinsic component of plasma membrane ISS
 molecular_functionGO:0000822 inositol hexakisphosphate binding ISS
 molecular_functionGO:0015114 phosphate ion transmembrane transporter activity ISS
 molecular_functionGO:0015562 efflux transmembrane transporter activity ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain microglial cell decreased amount , abnormal
brain macrophage decreased amount , abnormal
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 ZFA:0000012 central nervous system central nervous system macrophage decreased amount , abnormal
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 ZFA:0000368 integument integument macrophage decreased amount , abnormal
integument macrophage lacks parts or has fewer parts of type macrophage cell projection, abnormal
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 ZFA:0000519 hemal arch hemal arch anatomical region decreased size , abnormal
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 ZFA:0001094 whole organism whole organism decreased size , abnormal
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 ZFA:0001114 head head macrophage morphology , abnormal
head neutrophil increased amount , abnormal
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 ZFA:0001189 vertebra vertebra morphology , abnormal
vertebra increased volume , abnormal
vertebra increased area , abnormal
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 ZFA:0005314 blood vessel blood vessel mislocalised , abnormal
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 ZFA:0009077 microglial cell microglial cell decreased amount , abnormal
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 ZFA:0009141 macrophage macrophage has fewer parts of type macrophage cell projection, abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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