ENSDARG00000030357


Danio rerio

Features
Gene ID: ENSDARG00000030357
  
Biological name :zgc:66313
  
Synonyms : zgc:66313
  
Possible biological names infered from orthology : Alpha-amylase 1 / Amy1 / AMY1A / AMY1B / AMY1C / Amy2 / AMY2A / Amy2a1 / Amy2a2 / Amy2a3 / Amy2a4 / AMY2B / amylase 2a1 / amylase 2a2 / amylase 2a3 / amylase 2a4 / amylase, alpha 1A (salivary) / amylase, alpha 1B (salivary) / amylase, alpha 1C (salivary) / amylase, alpha 2A (pancreatic) / amylase, alpha 2B (pancreatic) / P00687 / P00688 / P04745 / P04746 / P19961 / Pancreatic alpha-amylase
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 43863708
Gene end: 43888569
  
Corresponding Affymetrix probe sets: Dr.14647.1.A1_at (Zebrafish Array)   NM_200428_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000112576
Ensembl peptide - ENSDARP00000137839
Ensembl peptide - ENSDARP00000122652
Ensembl peptide - ENSDARP00000120480
Ensembl peptide - ENSDARP00000118621
Ensembl peptide - ENSDARP00000118615
Ensembl peptide - ENSDARP00000116065
NCBI entrez gene - 393400     See in Manteia.
RefSeq - NM_200428
RefSeq Peptide - NP_956722
swissprot - E9QG63
swissprot - E9QCQ5
swissprot - A0A1B0GWZ8
swissprot - A0A0R4IST0
swissprot - F1RD28
swissprot - E9QI97
swissprot - E9QG77
ZFIN ID - ZDB-GENE-040426-1606
Ensembl - ENSDARG00000030357
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AMY1AENSGALG00000005147Gallus gallus
 AMY2AENSGALG00000038740Gallus gallus
 AMY1AENSG00000237763Homo sapiens
 AMY1BENSG00000174876Homo sapiens
 AMY1CENSG00000187733Homo sapiens
 AMY2AENSG00000243480Homo sapiens
 AMY2BENSG00000240038Homo sapiens
 Amy1ENSMUSG00000074264Mus musculus
 Amy2ENSMUSG00000074268Mus musculus
 Amy2a1ENSMUSG00000070360Mus musculus
 Amy2a2ENSMUSG00000096569Mus musculus
 Amy2a3ENSMUSG00000093931Mus musculus
 Amy2a4ENSMUSG00000096770Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:92137 / Amy1* / Amy2* / AMY1B* / AMY1C* / AMY2A* / AMY2B* / AMY1A* / P04746* / P00688* / P00687* / Amy2a1* / Amy2a2* / Amy2a3* / Amy2a4* / P19961* / P04745* / amylase 2a3* / amylase 2a1...ENSDARG0000000944382
amy2a / amylase, alpha 2A (pancreatic) / Amy2* / Amy1* / AMY2B* / AMY1A* / AMY1B* / AMY1C* / Amy2a3* / Amy2a4* / P00687* / P04745* / Amy2a2* / P00688* / Amy2a1* / P19961* / P04746* / amylas...ENSDARG0000001385679


Protein motifs (from Interpro)
Interpro ID Name
 IPR006046  Alpha amylase
 IPR006047  Glycosyl hydrolase, family 13, catalytic domain
 IPR006048  Alpha-amylase/branching enzyme, C-terminal all beta
 IPR017853  Glycoside hydrolase superfamily
 IPR031319  Alpha-amylase, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0071391 cellular response to estrogen stimulus IDA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004556 alpha-amylase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA
 molecular_functionGO:0043169 cation binding IEA
 molecular_functionGO:0103025 alpha-amylase activity (releasing maltohexaose) IEA


Pathways (from Reactome)
Pathway description
Digestion of dietary carbohydrate


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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