ENSDARG00000030591


Danio rerio

Features
Gene ID: ENSDARG00000030591
  
Biological name :lrrc42
  
Synonyms : leucine rich repeat containing 42 / lrrc42 / Q6P5J6
  
Possible biological names infered from orthology : Leucine-rich repeat-containing protein 42 / Q8R2U7 / Q9Y546
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 26604773
Gene end: 26611033
  
Corresponding Affymetrix probe sets: Dr.17826.1.S1_at (Zebrafish Array)   NM_199747_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000045055
NCBI entrez gene - 326793     See in Manteia.
RefSeq - NM_199747
RefSeq Peptide - NP_956041
swissprot - Q6P5J6
ZFIN ID - ZDB-GENE-030131-4992
Ensembl - ENSDARG00000030591
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRC42ENSGALG00000010743Gallus gallus
 LRRC42ENSG00000116212Homo sapiens
 Lrrc42ENSMUSG00000028617Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr