ENSDARG00000031540


Danio rerio

Features
Gene ID: ENSDARG00000031540
  
Biological name :tmem200a
  
Synonyms : Q5RGQ8 / tmem200a / transmembrane protein 200A
  
Possible biological names infered from orthology : Q86VY9 / Q8C817
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 2227860
Gene end: 2241954
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000126735
Ensembl peptide - ENSDARP00000041249
NCBI entrez gene - 556369     See in Manteia.
RefSeq - NM_001044800
RefSeq Peptide - NP_001038265
swissprot - B7ZV39
swissprot - Q5RGQ8
ZFIN ID - ZDB-GENE-040724-81
Ensembl - ENSDARG00000031540
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMEM200AENSGALG00000002282Gallus gallus
 Q86VY9ENSG00000164484Homo sapiens
 Q8C817ENSMUSG00000049420Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMEM200C / transmembrane protein 200C / A6NKL6*ENSDARG0000010117229
CABZ01081294.1 / A6NKL6* / TMEM200C* / transmembrane protein 200C*ENSDARG0000011672727
si:ch211-204a13.2 / Q69YZ2* / TMEM200B* / transmembrane protein 200B*ENSDARG0000010427419


Protein motifs (from Interpro)
Interpro ID Name
 IPR018787  Protein of unknown function DUF2371, TMEM200


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr