ENSDARG00000032630


Danio rerio

Features
Gene ID: ENSDARG00000032630
  
Biological name :neb
  
Synonyms : neb / nebulin
  
Possible biological names infered from orthology : P20929
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 22805138
Gene end: 22892838
  
Corresponding Affymetrix probe sets: Dr.5224.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121248
Ensembl peptide - ENSDARP00000123050
Ensembl peptide - ENSDARP00000092486
Ensembl peptide - ENSDARP00000115733
Ensembl peptide - ENSDARP00000117320
swissprot - B0UY60
swissprot - B0UY61
swissprot - F1Q6R4
swissprot - F1Q824
swissprot - F1R8A4
ZFIN ID - ZDB-GENE-041111-216
Ensembl - ENSDARG00000032630
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000031552Gallus gallus
 NEBENSG00000183091Homo sapiens
 NebENSMUSG00000026950Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nrap / nebulin-related anchoring protein / Q80XB4* / Q86VF7*ENSDARG0000000934110
nebl / nebulette / Q0II04* / Q9DC07* / LIM zinc-binding domain-containing Nebulette *ENSDARG000000212001
lasp1 / LIM and SH3 protein 1 / Q14847* / Q61792* / LIM and SH3 domain protein 1 *ENSDARG000000578671


Protein motifs (from Interpro)
Interpro ID Name
 IPR000900  Nebulin repeat
 IPR001452  SH3 domain
 IPR013998  Nebulin-like
 IPR035629  Nebulin, SH3 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048747 muscle fiber development IMP
 molecular_functionGO:0003779 actin binding IEA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0001089 myoseptum myoseptum intracellular part aggregated , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased size , abnormal
whole organism viability , abnormal
whole organism movement behavioral quality , abnormal
Show

 ZFA:0001115 trunk trunk decreased thickness , abnormal
Show

 ZFA:0001117 post-vent region post-vent region decreased thickness , abnormal
post-vent region bent , abnormal
post-vent region edematous , abnormal
Show

 ZFA:0005145 muscle muscle refractivity , abnormal
muscle sarcomere disorganized , abnormal
Show

 ZFA:0005277 skeletal muscle skeletal muscle decreased size , abnormal
skeletal muscle contractility , abnormal
skeletal muscle decreased force , abnormal
skeletal muscle striated muscle thin filament decreased length , abnormal
skeletal muscle sarcomere decreased length , abnormal
skeletal muscle intracellular part aggregated , abnormal
Show

 ZFA:0009115 skeletal muscle cell skeletal muscle cell myofibril disorganized , abnormal
skeletal muscle cell filamentous actin aggregated , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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