ENSDARG00000033411


Danio rerio

Features
Gene ID: ENSDARG00000033411
  
Biological name :cabp1b
  
Synonyms : cabp1b / calcium binding protein 1b
  
Possible biological names infered from orthology : CABP1 / calcium binding protein 1 / Q9JLK7 / Q9NZU7
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 41409255
Gene end: 41450454
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000106036
Ensembl peptide - ENSDARP00000147136
NCBI entrez gene - 436687     See in Manteia.
RefSeq - NM_001002414
RefSeq Peptide - NP_001002414
swissprot - Q6DH19
ZFIN ID - ZDB-GENE-040718-111
Ensembl - ENSDARG00000033411
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABP1ENSGALG00000007116Gallus gallus
 CABP1ENSG00000157782Homo sapiens
 Cabp1ENSMUSG00000029544Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cabp1a / calcium binding protein 1a / CABP1* / Q9JLK7* / Q9NZU7* / calcium binding protein 1*ENSDARG0000001999085
cabp2a / calcium binding protein 2a / CABP2* / Q9NPB3* / calcium binding protein 2*ENSDARG0000005201677
cabp2b / calcium binding protein 2b / CABP2* / Q9NPB3* / calcium binding protein 2*ENSDARG0000005227770
cabp5a / calcium binding protein 5a / CABP5* / Q9JLK3* / Q9NP86* / calcium binding protein 5*ENSDARG0000000257667
cabp5b / calcium binding protein 5b / CABP5* / Q9JLK3* / Q9NP86* / calcium binding protein 5*ENSDARG0000002848567
cabp4 / calcium binding protein 4 / P57796* / Q8VHC5*ENSDARG0000000886660
si:cabz01076231.1 / CABP4* / P57796* / Q8VHC5* / calcium binding protein 4*ENSDARG0000010563156
calm2a / calm2b / calm1a / calm3a / Q6PI52 / calmodulin 1aENSDARG0000002181136
calm2a / calm2b / calm3a / Q6PI52 / calmodulin 2b, (phosphorylase kinase, delta)ENSDARG0000003142736
calm1b / calm2a / calm2b / Q6PI52 / calm3a / calmodulin 1b / Calm3* / CALM1* / P0DP27* / P0DP28* / P0DP26* / P0DP23* / calmodulin 1*ENSDARG0000003418736
calm2b / calm3a / calm2a / calm3b / Q6PI52 / calmodulin 2a (phosphorylase kinase, delta)ENSDARG0000007405736
calm2a / calm2b / calm3a / Q6PI52 / calmodulin 2a (phosphorylase kinase, delta)ENSDARG0000010082536
tnnc1a / troponin C type 1a (slow)ENSDARG0000001140033
calm2a / calm2b / calm3a / Q6PI52 / calmodulin 3a (phosphorylase kinase, delta)ENSDARG0000001505033
tnnc1b / troponin C type 1b (slow) / TNNC1* / P63316* / P19123* / troponin C1, slow skeletal and cardiac type* / Troponin C, slow skeletal and cardiac muscles *ENSDARG0000003753933
tnnc2 / troponin C type 2 (fast) / P20801* / P02585* / Troponin C, skeletal muscle * / troponin C2, fast skeletal type*ENSDARG0000007083532
si:rp71-17i16.4 / TNNC2* / P20801* / P02585* / Troponin C, skeletal muscle * / troponin C2, fast skeletal type*ENSDARG0000009500231
calml4a / calmodulin-like 4a / CALML4* / Q91WQ9* / Q96GE6* / calmodulin like 4* / Calmodulin-like protein 4 *ENSDARG0000007580026
calml4b / calmodulin-like 4bENSDARG0000005934721


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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