ENSDARG00000033861


Danio rerio

Features
Gene ID: ENSDARG00000033861
  
Biological name :sepsecs
  
Synonyms : Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase / sepsecs
  
Possible biological names infered from orthology : O-phosphoseryl-tRNA(Sec) selenium transferase / Q6P6M7 / Q9HD40
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 71437142
Gene end: 71456117
  
Corresponding Affymetrix probe sets: Dr.16590.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000042491
swissprot - F1Q668
ZFIN ID - ZDB-GENE-040426-859
Ensembl - ENSDARG00000033861
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SEPSECSENSGALG00000014386Gallus gallus
 Q9HD40ENSG00000109618Homo sapiens
 Q6P6M7ENSMUSG00000029173Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008829  SepSecS/SepCysS family
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015424  Pyridoxal phosphate-dependent transferase
 IPR019872  O-phosphoseryl-tRNA(Sec) selenium transferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0097056 selenocysteinyl-tRNA(Sec) biosynthetic process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016785 transferase activity, transferring selenium-containing groups IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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