ENSDARG00000033967


Danio rerio

Features
Gene ID: ENSDARG00000033967
  
Biological name :trmt2b
  
Synonyms : A4QP75 / trmt2b / tRNA methyltransferase 2 homolog B
  
Possible biological names infered from orthology : Q8BQJ6 / Q96GJ1 / TRM2 tRNA methyltransferase 2B
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 30033036
Gene end: 30034754
  
Corresponding Affymetrix probe sets: Dr.4517.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000041701
Ensembl peptide - ENSDARP00000112957
NCBI entrez gene - 606657     See in Manteia.
RefSeq - NM_001122943
RefSeq Peptide - NP_001116415
swissprot - A4QP75
swissprot - A0A0R4I9B6
ZFIN ID - ZDB-GENE-050809-101
Ensembl - ENSDARG00000033967
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRMT2BENSGALG00000034383Gallus gallus
 Q96GJ1ENSG00000188917Homo sapiens
 Q8BQJ6ENSMUSG00000067369Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trmt2a / tRNA methyltransferase 2 homolog A / Q8BNV1* / Q8IZ69* / TRM2 tRNA methyltransferase 2A*ENSDARG0000000283035


Protein motifs (from Interpro)
Interpro ID Name
 IPR010280  (Uracil-5)-methyltransferase family
 IPR025823  tRNA (uracil-5-)-methyltransferase, metazoa
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001510 RNA methylation IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008173 RNA methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0030697 S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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