ENSDARG00000035028


Danio rerio

Features
Gene ID: ENSDARG00000035028
  
Biological name :lpcat4
  
Synonyms : lpcat4 / lysophosphatidylcholine acyltransferase 4
  
Possible biological names infered from orthology : Lysophospholipid acyltransferase LPCAT4 / Q643R3 / Q6NVG1
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 1473929
Gene end: 1495966
  
Corresponding Affymetrix probe sets: Dr.3466.1.A1_at (Zebrafish Array)   NM_205559_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000124058
Ensembl peptide - ENSDARP00000050686
NCBI entrez gene - 327566     See in Manteia.
RefSeq - NM_205559
RefSeq Peptide - NP_991122
swissprot - F8W3R6
swissprot - F1QD35
ZFIN ID - ZDB-GENE-030131-5777
Ensembl - ENSDARG00000035028
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LPCAT4ENSG00000176454Homo sapiens
 Lpcat4ENSMUSG00000027134Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lpcat1 / Q1LWG4 / lysophosphatidylcholine acyltransferase 1 / Q3TFD2* / Q8NF37*ENSDARG0000001150633
lpcat2 / lysophosphatidylcholine acyltransferase 2 / Q9D5U0* / Q7L5N7* / Q8BYI6* / Lpcat2b* / Lysophosphatidylcholine acyltransferase 2B *ENSDARG0000005301033
LO017917.1 / LPCAT1* / Q8NF37* / lysophosphatidylcholine acyltransferase 1*ENSDARG000001156517


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR002123  Phospholipid/glycerol acyltransferase
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA


Pathways (from Reactome)
Pathway description
Acyl chain remodelling of PC
Acyl chain remodelling of PS
Acyl chain remodelling of PE
Acyl chain remodelling of PG
Synthesis of PA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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