ENSDARG00000035054


Danio rerio

Features
Gene ID: ENSDARG00000035054
  
Biological name :pdcd10a
  
Synonyms : pdcd10a / programmed cell death 10a / Q6PHH3
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 5086318
Gene end: 5111449
  
Corresponding Affymetrix probe sets: Dr.20373.2.A1_at (Zebrafish Array)   NM_200555_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000046901
Ensembl peptide - ENSDARP00000156496
NCBI entrez gene - 393527     See in Manteia.
RefSeq - XM_005158980
RefSeq - NM_200555
RefSeq Peptide - NP_956849
swissprot - Q6PHH3
ZFIN ID - ZDB-GENE-040426-1432
Ensembl - ENSDARG00000035054
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pdcd10b / programmed cell death 10bENSDARG0000001259192
CT027583.1 / PDCD10* / Q9BUL8* / programmed cell death 10*ENSDARG0000011195214


Protein motifs (from Interpro)
Interpro ID Name
 IPR009652  Programmed cell death protein 10


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0001568 blood vessel development IMP
 biological_processGO:0001944 vasculature development IGI
 biological_processGO:0003007 heart morphogenesis IGI
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0007507 heart development IGI
 biological_processGO:0043009 chordate embryonic development IGI
 biological_processGO:0048514 blood vessel morphogenesis IGI
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000114 heart heart dilated , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr