ENSDARG00000035609


Danio rerio

Features
Gene ID: ENSDARG00000035609
  
Biological name :mtnr1c
  
Synonyms : melatonin receptor 1C / mtnr1c
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 22633188
Gene end: 22665855
  
Corresponding Affymetrix probe sets: Dr.20976.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000106863
NCBI entrez gene - 30661     See in Manteia.
RefSeq - NM_001161484
RefSeq Peptide - NP_001154956
swissprot - A2BGT9
ZFIN ID - ZDB-GENE-990415-158
Ensembl - ENSDARG00000035609
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GPR50ENSGALG00000009067Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mtnr1ab / melatonin receptor 1A bENSDARG0000005585265
mtnr1aa / melatonin receptor 1A aENSDARG0000003754562
P51049 / mtnr1bb / melatonin receptor 1Bb / MTNR1B* / P49286* / melatonin receptor 1B*ENSDARG0000008649361
mtnr1ba / melatonin receptor type 1BaENSDARG0000005383357
mtnr1al / melatonin receptor type 1A likeENSDARG0000001205755
gpr135 / G protein-coupled receptor 135 / Q8IZ08*ENSDARG0000002858618
CR392335.1 / AC018709.1*ENSDARG000001156169


Protein motifs (from Interpro)
Interpro ID Name
 IPR000025  Melatonin receptor family
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR002279  Melatonin receptor type 1C
 IPR017452  GPCR, rhodopsin-like, 7TM
 IPR027459  Melatonin receptor 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0008502 melatonin receptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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