ENSDARG00000035699


Danio rerio
targetingsrp19signalrecognitionsrp-dependentcotranslationalproteinmembraneparticlesrpsubunittranslocationsequenceendoplasmicreticulumsrnabinding

Features
Gene ID: ENSDARG00000035699
  
Biological name :srp19
  
Synonyms : signal recognition particle 19 / srp19
  
Possible biological names infered from orthology : P09132 / Q15695
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 537809
Gene end: 544787
  
Corresponding Affymetrix probe sets: Dr.22406.1.S1_at (Zebrafish Array)   NM_213343_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000051775
NCBI entrez gene - 406652     See in Manteia.
RefSeq - NM_213343
RefSeq Peptide - NP_998508
swissprot - Q7T3C9
ZFIN ID - ZDB-GENE-040426-2657
Ensembl - ENSDARG00000035699
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SRP19ENSGALG00000000218Gallus gallus
 SRP19ENSG00000153037Homo sapiens
 Srp19ENSMUSG00000014504Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002778  Signal recognition particle, SRP19 subunit


Gene Ontology (GO)
macromolecule localizationestablishment of localizationcellular localizationcellular component organizationcellular component biogenesismacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcellular component biogenesismacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcellular component biogenesismacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcellular component biogenesismacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcellular component biogenesismacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcellular component biogenesismacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcellular component biogenesismacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcellular component biogenesismacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcellular component biogenesismacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcellular component biogenesismacromolecule localizationmacromolecule localizationestablishment of localizatioestablishment of localizationcellular localizationcellular localizationcellular component organizatcellular component organizationcellular component biogenesicellular component biogenesis
organic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound binding
cellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellcellprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA
 biological_processGO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation IBA
 biological_processGO:0006617 SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition IBA
 cellular_componentGO:0005786 signal recognition particle, endoplasmic reticulum targeting IBA
 cellular_componentGO:0048500 signal recognition particle IEA
 molecular_functionGO:0008312 7S RNA binding IBA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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