ENSDARG00000036359


Danio rerio

Features
Gene ID: ENSDARG00000036359
  
Biological name :riox2
  
Synonyms : ribosomal oxygenase 2 / riox2
  
Possible biological names infered from orthology : Q8CD15 / Q8IUF8
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 23088
Gene end: 28198
  
Corresponding Affymetrix probe sets: Dr.26464.1.S1_at (Zebrafish Array)   NM_200337_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000025350
NCBI entrez gene - 393308     See in Manteia.
RefSeq - NM_200337
RefSeq Peptide - NP_956631
swissprot - F1R7K2
ZFIN ID - ZDB-GENE-040426-1283
Ensembl - ENSDARG00000036359
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MINAENSGALG00000039302Gallus gallus
 RIOX2ENSG00000170854Homo sapiens
 Riox2ENSMUSG00000022724Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
riox1 / ribosomal oxygenase 1 / Q9H6W3* / Q9JJF3*ENSDARG0000006783826


Protein motifs (from Interpro)
Interpro ID Name
 IPR003347  JmjC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006338 chromatin remodeling IBA
 biological_processGO:0030961 peptidyl-arginine hydroxylation IBA
 biological_processGO:0034720 histone H3-K4 demethylation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IBA
 biological_processGO:0070544 histone H3-K36 demethylation IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0032453 histone demethylase activity (H3-K4 specific) IBA
 molecular_functionGO:0051864 histone demethylase activity (H3-K36 specific) IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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