ENSDARG00000036894


Danio rerio
trnasynthetasecomplexbindingtrna-bindingdomainnucleicacid-bindingob-foldaminoacylationproteintranslationaminoacyl-trnamultienzymemethionylglutamylrna

Features
Gene ID: ENSDARG00000036894
  
Biological name :zgc:101853
  
Synonyms : zgc:101853
  
Possible biological names infered from orthology : AIMP1 / aminoacyl tRNA synthetase complex interacting multifunctional protein 1 / Q12904
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 45402128
Gene end: 45407724
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124161
Ensembl peptide - ENSDARP00000124444
Ensembl peptide - ENSDARP00000124478
Ensembl peptide - ENSDARP00000123956
Ensembl peptide - ENSDARP00000124114
NCBI entrez gene - 494049     See in Manteia.
RefSeq - NM_001008592
RefSeq - XM_021469794
RefSeq Peptide - NP_001008592
swissprot - F8W3A3
swissprot - F8W370
swissprot - F8W487
swissprot - F8W4R7
swissprot - F8W4W5
ZFIN ID - ZDB-GENE-041212-13
Ensembl - ENSDARG00000036894
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AIMP1ENSGALG00000010553Gallus gallus
 AIMP1ENSG00000164022Homo sapiens
 Aimp1ENSMUSG00000028029Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
aimp1 / aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 / Q12904*ENSDARG0000006003638


Protein motifs (from Interpro)
Interpro ID Name
 IPR002547  tRNA-binding domain
 IPR012340  Nucleic acid-binding, OB-fold


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabnitrogen compound metabolic processbiosynthetic processbiosynthetic processcellular metabolic proccellular metabolic processprimary metabolic proceprimary metabolic processsmall molecule metabolismall molecule metabolic processorganic substance metaborganic substance metabolic process
organic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound binding
cellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellprotein-containing complexcellcellprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0006418 tRNA aminoacylation for protein translation IBA
 cellular_componentGO:0017101 aminoacyl-tRNA synthetase multienzyme complex IBA
 cellular_componentGO:0017102 methionyl glutamyl tRNA synthetase complex IBA
 molecular_functionGO:0000049 tRNA binding IBA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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