ENSDARG00000037476


Danio rerio

Features
Gene ID: ENSDARG00000037476
  
Biological name :sorbs3
  
Synonyms : sorbin and SH3 domain containing 3 / sorbs3
  
Possible biological names infered from orthology : O60504 / Q9R1Z8
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 38318357
Gene end: 38406868
  
Corresponding Affymetrix probe sets: Dr.18350.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000113033
Ensembl peptide - ENSDARP00000147548
Ensembl peptide - ENSDARP00000119039
Ensembl peptide - ENSDARP00000117447
Ensembl peptide - ENSDARP00000114568
Ensembl peptide - ENSDARP00000101670
Ensembl peptide - ENSDARP00000110450
NCBI entrez gene - 541478     See in Manteia.
RefSeq - NM_001014290
RefSeq Peptide - NP_001014312
swissprot - E9QBV0
swissprot - E7F8Y3
swissprot - F1QE92
swissprot - F1R0C1
swissprot - E9QIP8
swissprot - E9QD81
ZFIN ID - ZDB-GENE-050327-1
Ensembl - ENSDARG00000037476
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 O60504ENSG00000120896Homo sapiens
 Q9R1Z8ENSMUSG00000022091Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sorbs2b / sorbin and SH3 domain containing 2b / O94875* / Q3UTJ2* / SORBS2* / sorbin and SH3 domain containing 2*ENSDARG0000006160331
sorbs2a / sorbin and SH3 domain containing 2a / O94875* / Q3UTJ2* / SORBS2* / sorbin and SH3 domain containing 2*ENSDARG0000000304627
sorbs1 / sorbin and SH3 domain containing 1 / Q9BX66*ENSDARG0000010343527
sh3rf1 / SH3 domain containing ring finger 1 / Q7Z6J0*ENSDARG0000007047015
SH3RF3 / si:ch211-124n19.2 / Q8TEJ3* / SH3 domain containing ring finger 3*ENSDARG0000010233413
sh3d19 / SH3 domain containing 19 / Q5HYK7* / Q91X43* / SH3 domain-containing protein 19 *ENSDARG0000008820212
sh3rf2 / SH3 domain containing ring finger 2 / Q8BZT2* / Q8TEC5* / Putative E3 ubiquitin-protein ligase SH3RF2 *ENSDARG0000010117812


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR003127  SoHo domain
 IPR006573  Neuralized homology repeat (NHR) domain
 IPR028510  Vinexin
 IPR035607  Vinexin, SH3 domain 3
 IPR035609  Vinexin, SH3 domain 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007015 actin filament organization IEA
 biological_processGO:0007155 cell adhesion IEA


Pathways (from Reactome)
Pathway description
Smooth Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000200 dorsal root ganglion dorsal root ganglion decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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