ENSDARG00000037713


Danio rerio

Features
Gene ID: ENSDARG00000037713
  
Biological name :pcnp
  
Synonyms : pcnp / PEST proteolytic signal containing nuclear protein
  
Possible biological names infered from orthology : Mus musculus PEST proteolytic signal containing nuclear protein (Pcnp), transcript variant 3, mRNA. / Q6P8I4 / Q8WW12
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 7556965
Gene end: 7561222
  
Corresponding Affymetrix probe sets: Dr.15829.1.S1_at (Zebrafish Array)   NM_001006035_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000113454
Ensembl peptide - ENSDARP00000092359
Ensembl peptide - ENSDARP00000113543
Ensembl peptide - ENSDARP00000153830
Ensembl peptide - ENSDARP00000117647
Ensembl peptide - ENSDARP00000054924
NCBI entrez gene - 450014     See in Manteia.
NCBI entrez gene - 110437793     See in Manteia.
RefSeq - NM_001006035
RefSeq - NM_001326716
RefSeq - NM_001326717
RefSeq - NM_001326718
RefSeq - XM_021471049
RefSeq Peptide - NP_001313648
RefSeq Peptide - NP_001006035
RefSeq Peptide - NP_001313645
RefSeq Peptide - NP_001313646
RefSeq Peptide - NP_001313647
swissprot - Q5XJC4
swissprot - B8JKI1
swissprot - B8JKI0
swissprot - B8JKH9
ZFIN ID - ZDB-GENE-041010-130
Ensembl - ENSDARG00000037713
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PCNPENSGALG00000015330Gallus gallus
 PCNPENSG00000081154Homo sapiens
 PcnpENSMUSG00000071533Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR029169  PEST proteolytic signal-containing nuclear protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr