ENSDARG00000037852


Danio rerio

Features
Gene ID: ENSDARG00000037852
  
Biological name :zgc:101663
  
Synonyms : Q5U3T0 / zgc:101663
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 383782
Gene end: 397300
  
Corresponding Affymetrix probe sets: Dr.2494.1.A1_at (Zebrafish Array)   NM_001007437_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000055147
Ensembl peptide - ENSDARP00000101204
NCBI entrez gene - 492796     See in Manteia.
RefSeq - NM_001007437
RefSeq Peptide - NP_001007438
swissprot - Q5U3T0
ZFIN ID - ZDB-GENE-041114-149
Ensembl - ENSDARG00000037852
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mgat4c / mgat4 family, member C / Q9D306* / Q9UBM8* / Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C *ENSDARG0000004179148
mgat4b / Q6GMK0 / mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B / Q9UQ53* / Q812F8* / Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltra...ENSDARG0000000411530
mgat4a / mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A / Q812G0* / Q9UM21* / Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase ...ENSDARG0000006333029
zgc:154054ENSDARG0000009992326


Protein motifs (from Interpro)
Interpro ID Name
 IPR006759  Glycosyl transferase family 54


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006486 protein glycosylation IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008454 alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0016758 transferase activity, transferring hexosyl groups IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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