ENSDARG00000037961


Danio rerio

Features
Gene ID: ENSDARG00000037961
  
Biological name :rcn3
  
Synonyms : rcn3 / reticulocalbin 3, EF-hand calcium binding domain
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 32535986
Gene end: 32541072
  
Corresponding Affymetrix probe sets: Dr.1232.1.A1_at (Zebrafish Array)   NM_001002158_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000125637
Ensembl peptide - ENSDARP00000055323
NCBI entrez gene - 415248     See in Manteia.
RefSeq - XM_005164012
RefSeq - NM_001002158
RefSeq Peptide - NP_001002158
swissprot - I3IRX8
swissprot - F1R0M8
ZFIN ID - ZDB-GENE-040625-175
Ensembl - ENSDARG00000037961
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rcn1 / reticulocalbin 1, EF-hand calcium binding domain / Q15293* / Q05186* / AL035078.4* / Reticulocalbin-1 *ENSDARG0000007000660
calub / calumenin bENSDARG0000000511557
calua / calumenin a / CALU* / O35887* / O43852* / calumenin*ENSDARG0000004567657
rcn2 / reticulocalbin 2 / Q14257* / Q8BP92*ENSDARG0000003937830
sdf4 / Q7ZUC2 / stromal cell derived factor 4 / Q61112* / Q9BRK5*ENSDARG0000007068228


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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