ENSDARG00000038429


Danio rerio

Features
Gene ID: ENSDARG00000038429
  
Biological name :csrnp1b
  
Synonyms : csrnp1b / cysteine-serine-rich nuclear protein 1b
  
Possible biological names infered from orthology : CSRNP1 / cysteine and serine rich nuclear protein 1 / Mus musculus cysteine-serine-rich nuclear protein 1 (Csrnp1), transcript variant 3, mRNA. / P59054 / Q96S65
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 19707609
Gene end: 19719240
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000056081
Ensembl peptide - ENSDARP00000112890
Ensembl peptide - ENSDARP00000098740
NCBI entrez gene - 322795     See in Manteia.
RefSeq - NM_199619
RefSeq Peptide - NP_955913
swissprot - E9QH67
swissprot - E9QDT1
swissprot - F1QNJ1
ZFIN ID - ZDB-GENE-030131-1515
Ensembl - ENSDARG00000038429
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSRNP1ENSGALG00000027905Gallus gallus
 CSRNP1ENSG00000144655Homo sapiens
 Csrnp1ENSMUSG00000032515Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
csrnp1a / cysteine-serine-rich nuclear protein 1a / Q96S65* / P59054* / CSRNP1* / cysteine and serine rich nuclear protein 1* / Mus musculus cysteine-serine-rich nuclear protein 1 (Csrnp1),...ENSDARG0000003142642
CSRNP3 / cysteine and serine rich nuclear protein 3 / Q8WYN3*ENSDARG0000007974133
csrnp2 / cysteine-serine-rich nuclear protein 2 / Q8BGQ2* / Q9H175* / cysteine and serine rich nuclear protein 2*ENSDARG0000007597230


Protein motifs (from Interpro)
Interpro ID Name
 IPR023260  Cysteine/serine-rich nuclear protein family
 IPR031972  Cysteine/serine-rich nuclear protein, N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0021536 diencephalon development IMP
 biological_processGO:0030901 midbrain development IMP
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary malformed , abnormal
midbrain hindbrain boundary physical object quality , abnormal
Show

 ZFA:0000051 otic vesicle otic vesicle decreased size , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000109 forebrain forebrain physical object quality , abnormal
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 ZFA:0000128 midbrain midbrain neuron decreased amount , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0009256 nucleate erythrocyte nucleate erythrocyte decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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