ENSDARG00000038805


Danio rerio

Features
Gene ID: ENSDARG00000038805
  
Biological name :pigp
  
Synonyms : phosphatidylinositol glycan anchor biosynthesis, class P / pigp
  
Possible biological names infered from orthology : P57054 / Phosphatidylinositol N-acetylglucosaminyltransferase subunit P / Q9JHG1
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 110868
Gene end: 116036
  
Corresponding Affymetrix probe sets: Dr.5308.1.A1_at (Zebrafish Array)   NM_199712_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000056671
Ensembl peptide - ENSDARP00000113194
Ensembl peptide - ENSDARP00000147536
NCBI entrez gene - 325316     See in Manteia.
RefSeq - NM_199712
RefSeq Peptide - NP_956006
swissprot - F1RAM1
swissprot - Q6PBK4
ZFIN ID - ZDB-GENE-030131-4041
Ensembl - ENSDARG00000038805
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PIGPENSGALG00000038098Gallus gallus
 PIGPENSG00000185808Homo sapiens
 PigpENSMUSG00000022940Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013717  PIG-P
 IPR016542  Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006506 GPI anchor biosynthetic process IEA
 biological_processGO:0046328 regulation of JNK cascade IDA
 biological_processGO:0060026 convergent extension IMP
 biological_processGO:0060028 convergent extension involved in axis elongation IMP
 biological_processGO:1904103 regulation of convergent extension involved in gastrulation IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of glycosylphosphatidylinositol (GPI)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000092 axis axis shortened , abnormal
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 ZFA:0000117 hypoblast hypoblast convergent extension process quality , abnormal
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 ZFA:0000132 neural plate neural plate increased width , abnormal
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 ZFA:0000135 notochord notochord increased width , abnormal
notochord cell circular , abnormal
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 ZFA:0001058 caudal fin caudal fin folded , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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