ENSDARG00000038976


Danio rerio

Features
Gene ID: ENSDARG00000038976
  
Biological name :pdcd7
  
Synonyms : pdcd7 / programmed cell death 7 / ubap1lb
  
Possible biological names infered from orthology : Q8N8D1
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 13684012
Gene end: 13737618
  
Corresponding Affymetrix probe sets: Dr.16134.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000142547
Ensembl peptide - ENSDARP00000056892
NCBI entrez gene - 100334622     See in Manteia.
swissprot - F1QGK3
swissprot - A0A140LH17
ZFIN ID - ZDB-GENE-120406-5
ZFIN ID - ZDB-GENE-040728-3
Ensembl - ENSDARG00000038976
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PDCD7ENSGALG00000021027Gallus gallus
 PDCD7ENSG00000090470Homo sapiens
 Pdcd7ENSMUSG00000041837Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009060  UBA-like superfamily
 IPR015940  Ubiquitin-associated domain
 IPR031974  Programmed cell death protein 7


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
mRNA Splicing - Minor Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain necrotic , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000114 heart heart quality , abnormal
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 ZFA:0001114 head head color , abnormal
head necrotic , abnormal
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 ZFA:0001115 trunk trunk degenerate , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr