ENSDARG00000039196


Danio rerio

Features
Gene ID: ENSDARG00000039196
  
Biological name :greb1l
  
Synonyms : greb1l / growth regulation by estrogen in breast cancer-like
  
Possible biological names infered from orthology : B9EJV3 / GREB1-like protein / growth regulation by estrogen in breast cancer 1 like / Q9C091
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 11685742
Gene end: 11833356
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000122959
Ensembl peptide - ENSDARP00000057267
NCBI entrez gene - 100005373     See in Manteia.
RefSeq - XM_001344416
RefSeq - XM_009298040
RefSeq - XM_021466912
swissprot - B8JKP6
ZFIN ID - ZDB-GENE-030131-4022
Ensembl - ENSDARG00000039196
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GREB1LENSGALG00000014935Gallus gallus
 GREB1LENSG00000141449Homo sapiens
 B9EJV3ENSMUSG00000042942Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
greb1 / growth regulation by estrogen in breast cancer 1 / Q3UHK3* / Q4ZG55* / Protein GREB1 *ENSDARG0000007079445


Protein motifs (from Interpro)
Interpro ID Name
 IPR024840  GREB1-like
 IPR028422  GREB1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001822 kidney development IMP
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0048793 pronephros development IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000150 pronephric duct pronephric duct dilated , abnormal
pronephric duct kinked , abnormal
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 ZFA:0000151 pronephros pronephros morphology , abnormal
pronephros dilated , abnormal
pronephros cystic , abnormal
Show

 ZFA:0001094 whole organism whole organism viability , abnormal
whole organism decreased life span , abnormal
Show

 ZFA:0001306 pharyngeal arch pharyngeal arch posterior-most region hypoplastic , abnormal
Show

 ZFA:0001410 orbital region orbital region edematous , abnormal
Show

 ZFA:0001620 pronephric proximal convoluted tubule pronephric proximal convoluted tubule dilated , abnormal
pronephric proximal convoluted tubule decreased size , abnormal
pronephric proximal convoluted tubule decreased distribution , abnormal
pronephric proximal convoluted tubule decreased area , abnormal
Show

 ZFA:0001621 pronephric proximal straight tubule pronephric proximal straight tubule dilated , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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