ENSDARG00000039354


Danio rerio

Features
Gene ID: ENSDARG00000039354
  
Biological name :ska1
  
Synonyms : Q6DHG8 / ska1 / spindle and kinetochore associated complex subunit 1
  
Possible biological names infered from orthology : Q96BD8
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 17543276
Gene end: 17550931
  
Corresponding Affymetrix probe sets: Dr.9266.1.A1_at (Zebrafish Array)   NM_001002592_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000057512
Ensembl peptide - ENSDARP00000117308
NCBI entrez gene - 436865     See in Manteia.
RefSeq - NM_001002592
RefSeq Peptide - NP_001002592
swissprot - Q6DHG8
ZFIN ID - ZDB-GENE-040718-334
Ensembl - ENSDARG00000039354
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SKA1ENSG00000154839Homo sapiens
 Ska1ENSMUSG00000036223Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009829  Spindle and kinetochore-associated protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000278 mitotic cell cycle ISS
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007059 chromosome segregation IEA
 biological_processGO:0031110 regulation of microtubule polymerization or depolymerization ISS
 biological_processGO:0051301 cell division ISS
 cellular_componentGO:0000775 chromosome, centromeric region IEA
 cellular_componentGO:0000776 kinetochore IEA
 cellular_componentGO:0000777 condensed chromosome kinetochore IEA
 cellular_componentGO:0000940 condensed chromosome outer kinetochore ISS
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005819 spindle IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0005876 spindle microtubule ISS
 molecular_functionGO:0008017 microtubule binding ISS


Pathways (from Reactome)
Pathway description
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
RHO GTPases Activate Formins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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