ENSDARG00000039490


Danio rerio

Features
Gene ID: ENSDARG00000039490
  
Biological name :pitpnaa
  
Synonyms : phosphatidylinositol transfer protein, alpha a / pitpnaa
  
Possible biological names infered from orthology : P53810 / phosphatidylinositol transfer protein alpha / PITPNA / Q00169
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 28410664
Gene end: 28425011
  
Corresponding Affymetrix probe sets: Dr.12713.1.S1_at (Zebrafish Array)   NM_200935_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000122708
Ensembl peptide - ENSDARP00000057256
Ensembl peptide - ENSDARP00000057696
NCBI entrez gene - 393909     See in Manteia.
RefSeq - NM_200935
RefSeq - XM_005157645
RefSeq Peptide - NP_957229
swissprot - Q803U3
swissprot - E9QI85
ZFIN ID - ZDB-GENE-040426-744
Ensembl - ENSDARG00000039490
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000023806Gallus gallus
 ENSGALG00000035005Gallus gallus
 PITPNAENSG00000174238Homo sapiens
 P53810ENSMUSG00000017781Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pitpnab / phosphatidylinositol transfer protein, alpha b / PITPNA* / P53810* / Q00169* / phosphatidylinositol transfer protein alpha*ENSDARG0000004409177
pitpnb / phosphatidylinositol transfer protein, beta / P48739*ENSDARG0000003600575
pitpnbl / phosphatidylinositol transfer protein, beta, likeENSDARG0000001531070
zgc:101640ENSDARG0000002280734
PITPNC1 / phosphatidylinositol transfer protein, cytoplasmic 1 / Q9UKF7*ENSDARG0000009926027
pitpnm3 / PITPNM family member 3ENSDARG000000552553
plrdgb / PITP-less RdgB-like proteinENSDARG000000891012


Protein motifs (from Interpro)
Interpro ID Name
 IPR001666  Phosphatidylinositol transfer protein
 IPR023393  START-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007409 axonogenesis IMP
 biological_processGO:0015914 phospholipid transport IEA
 biological_processGO:0043009 chordate embryonic development IMP
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0005548 phospholipid transporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000075 spinal cord spinal cord sensory neuron decreased amount , abnormal
Show

 ZFA:0001056 myotome myotome skeletal myofibril assembly process quality , ameliorated
myotome sarcomere morphology , ameliorated
myotome skeletal muscle cell spatial pattern , ameliorated
Show

 ZFA:0001094 whole organism whole organism increased amount , abnormal
whole organism decreased amount , abnormal
Show

 ZFA:0009243 CaP motoneuron CaP motoneuron axon decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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