ENSDARG00000039997


Danio rerio

Features
Gene ID: ENSDARG00000039997
  
Biological name :ptp4a3
  
Synonyms : protein tyrosine phosphatase type IVA, member 3 / ptp4a3
  
Possible biological names infered from orthology : O75365 / Protein tyrosine phosphatase type IVA 3 / Q9D658
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 25088150
Gene end: 25149598
  
Corresponding Affymetrix probe sets: Dr.4535.1.S1_at (Zebrafish Array)   NM_213181_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000039012
Ensembl peptide - ENSDARP00000135356
Ensembl peptide - ENSDARP00000144460
Ensembl peptide - ENSDARP00000123957
Ensembl peptide - ENSDARP00000124859
Ensembl peptide - ENSDARP00000124887
NCBI entrez gene - 406460     See in Manteia.
RefSeq - NM_213181
RefSeq Peptide - NP_998346
swissprot - F8W245
swissprot - F8W486
swissprot - F8W630
swissprot - Q6NX92
ZFIN ID - ZDB-GENE-040426-2220
Ensembl - ENSDARG00000039997
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PTP4A3ENSGALG00000040969Gallus gallus
 O75365ENSG00000184489Homo sapiens
 Ptp4a3ENSMUSG00000059895Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ptp4a1 / protein tyrosine phosphatase type IVA, member 1 / Q63739* / Q93096* / protein tyrosine phosphatase 4a1*ENSDARG0000000624275
si:ch211-251p5.5 / O75365* / PTP4A3* / Q9D658* / Protein tyrosine phosphatase type IVA 3 * / protein tyrosine phosphatase type IVA, member 3*ENSDARG0000005481475
ptp4a2a / protein tyrosine phosphatase type IVA, member 2a / PTP4A2* / O70274* / Q12974* / Protein tyrosine phosphatase type IVA 2 * / protein tyrosine phosphatase type IVA, member 2*ENSDARG0000008744369
ptp4a2b / protein tyrosine phosphatase type IVA, member 2b / PTP4A2* / O70274* / Q12974* / Protein tyrosine phosphatase type IVA 2 * / protein tyrosine phosphatase type IVA, member 2*ENSDARG0000003567666


Protein motifs (from Interpro)
Interpro ID Name
 IPR000340  Dual specificity phosphatase, catalytic domain
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 biological_processGO:0043542 endothelial cell migration IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IBA
 molecular_functionGO:0008138 protein tyrosine/serine/threonine phosphatase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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