ENSDARG00000040387


Danio rerio

Features
Gene ID: ENSDARG00000040387
  
Biological name :mmd
  
Synonyms : mmd / monocyte to macrophage differentiation-associated
  
Possible biological names infered from orthology : Monocyte to macrophage differentiation factor / Q15546 / Q9CQY7
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 11548516
Gene end: 11576337
  
Corresponding Affymetrix probe sets: Dr.19995.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000059116
NCBI entrez gene - 641478     See in Manteia.
RefSeq - NM_001037419
RefSeq Peptide - NP_001032496
swissprot - D3YLD5
ZFIN ID - ZDB-GENE-051120-39
Ensembl - ENSDARG00000040387
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MMDENSGALG00000003078Gallus gallus
 MMDENSG00000108960Homo sapiens
 MmdENSMUSG00000003948Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mmd2b / monocyte to macrophage differentiation-associated 2b / MMD2* / Q8IY49* / Q8R189* / Monocyte to macrophage differentiation factor 2 * / monocyte to macrophage differentiation associated 2*ENSDARG0000008909059
mmd2a / monocyte to macrophage differentiation-associated 2a / MMD2* / Q8IY49* / Q8R189* / Monocyte to macrophage differentiation factor 2 * / monocyte to macrophage differentiation associated 2*ENSDARG0000008744641


Protein motifs (from Interpro)
Interpro ID Name
 IPR004254  AdipoR/Haemolysin-III-related
 IPR005744  Hly-III


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003007 heart morphogenesis IMP
 biological_processGO:0003272 endocardial cushion formation IMP
 biological_processGO:0019835 cytolysis IEA
 biological_processGO:0036302 atrioventricular canal development IMP
 biological_processGO:0046578 regulation of Ras protein signal transduction IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000007 blood blood accumulation heart , abnormal
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 ZFA:0000009 cardiac ventricle cardiac ventricle dilated , abnormal
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 ZFA:0000114 heart heart dilated , abnormal
heart edematous , abnormal
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 ZFA:0000471 atrium atrium dilated , abnormal
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 ZFA:0005072 endocardial ring endocardial ring absent , abnormal
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 ZFA:0009316 cardiac muscle cell cardiac muscle cell elongated , abnormal
cardiac muscle cell apoptotic , abnormal
cardiac muscle cell decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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