ENSDARG00000040528


Danio rerio

Features
Gene ID: ENSDARG00000040528
  
Biological name :lgals3bpb
  
Synonyms : lectin, galactoside-binding, soluble, 3 binding protein b / lgals3bpb
  
Possible biological names infered from orthology : galectin 3 binding protein / LGALS3BP / Q07797 / Q08380
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 57741933
Gene end: 57744323
  
Corresponding Affymetrix probe sets: Dr.5853.1.A1_at (Zebrafish Array)   NM_212873_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000092605
NCBI entrez gene - 405809     See in Manteia.
RefSeq - NM_212873
RefSeq Peptide - NP_998038
swissprot - F1Q6K5
ZFIN ID - ZDB-GENE-040426-2262
Ensembl - ENSDARG00000040528
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q08380ENSG00000108679Homo sapiens
 Q07797ENSMUSG00000033880Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:112492 / LGALS3BP (1 of many) / Q08380* / LGALS3BP* / galectin 3 binding protein*ENSDARG0000007684874
lgals3bpa / lectin, galactoside-binding, soluble, 3 binding protein a / Q08380* / LGALS3BP* / galectin 3 binding protein*ENSDARG0000003780573
btbd17b / BTB (POZ) domain containing 17b / Q9DB72* / BTBD17* / A6NE02* / BTB domain containing 17* / BTB/POZ domain-containing protein 17 *ENSDARG0000010247219
btbd17a / BTB (POZ) domain containing 17a / A6NE02* / BTBD17* / BTB domain containing 17*ENSDARG0000009932117


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR001190  SRCR domain
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR011705  BTB/Kelch-associated
 IPR017448  SRCR-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005044 scavenger receptor activity IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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