ENSDARG00000040538


Danio rerio

Features
Gene ID: ENSDARG00000040538
  
Biological name :spsb4b
  
Synonyms : splA/ryanodine receptor domain and SOCS box containing 4b / spsb4b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 41670742
Gene end: 41689981
  
Corresponding Affymetrix probe sets: Dr.10211.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000059326
Ensembl peptide - ENSDARP00000116797
Ensembl peptide - ENSDARP00000151504
NCBI entrez gene - 445080     See in Manteia.
RefSeq - XM_005157796
RefSeq - XM_009291907
RefSeq Peptide - NP_001003474
swissprot - Q6DBS3
swissprot - F6P6F9
ZFIN ID - ZDB-GENE-040801-213
Ensembl - ENSDARG00000040538
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
spsb4a / splA/ryanodine receptor domain and SOCS box containing 4a / SPSB4* / Q96A44* / Q8R5B6* / SPRY domain-containing SOCS box protein 4 * / splA/ryanodine receptor domain and SOCS box c...ENSDARG0000001608467
spsb1 / splA/ryanodine receptor domain and SOCS box containing 1 / Q96BD6* / Q9D5L7* / SPRY domain-containing SOCS box protein 1 *ENSDARG0000005651561
si:ch1073-228j22.2 / SPSB2* / Q99619* / O88838* / SPRY domain-containing SOCS box protein 2 * / splA/ryanodine receptor domain and SOCS box containing 2*ENSDARG0000008898532
fbxo45 / F-box protein 45 / P0C2W1* / Q8K3B1* / F-box/SPRY domain-containing protein 1 *ENSDARG0000007149230


Protein motifs (from Interpro)
Interpro ID Name
 IPR001496  SOCS box domain
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035556 intracellular signal transduction IEA
 cellular_componentGO:0005622 intracellular IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr