ENSDARG00000040614


Danio rerio

Features
Gene ID: ENSDARG00000040614
  
Biological name :sestd1
  
Synonyms : Q7SX85 / SEC14 and spectrin domains 1 / sestd1
  
Possible biological names infered from orthology : Q80UK0 / Q86VW0 / SEC14 and spectrin domain containing 1 / SEC14 domain and spectrin repeat-containing protein 1
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 43149854
Gene end: 43213229
  
Corresponding Affymetrix probe sets: Dr.2817.1.A1_at (Zebrafish Array)   DrAffx.2.60.S1_at (Zebrafish Array)   NM_182881_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000120314
Ensembl peptide - ENSDARP00000152076
Ensembl peptide - ENSDARP00000059447
Ensembl peptide - ENSDARP00000116017
NCBI entrez gene - 360133     See in Manteia.
RefSeq - NM_182881
RefSeq - XM_005167875
RefSeq Peptide - NP_878301
swissprot - E9QGU8
swissprot - Q7SX85
ZFIN ID - ZDB-GENE-030801-1
Ensembl - ENSDARG00000040614
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SESTD1ENSGALG00000009031Gallus gallus
 Q86VW0ENSG00000187231Homo sapiens
 Q80UK0ENSMUSG00000042272Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001251  CRAL-TRIO lipid binding domain
 IPR018159  Spectrin/alpha-actinin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048514 blood vessel morphogenesis IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000014 dorsal aorta dorsal aorta fused with posterior cardinal vein , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr