ENSDARG00000040635


Danio rerio

Features
Gene ID: ENSDARG00000040635
  
Biological name :rnf11b
  
Synonyms : ring finger protein 11b / rnf11b
  
Possible biological names infered from orthology : Q9QYK7 / Q9Y3C5 / ring finger protein 11 / RNF11
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 16424722
Gene end: 16464453
  
Corresponding Affymetrix probe sets: Dr.22417.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000089462
NCBI entrez gene - 100150568     See in Manteia.
RefSeq - NM_001128408
RefSeq Peptide - NP_001121880
swissprot - B0V2S5
ZFIN ID - ZDB-GENE-050913-69
Ensembl - ENSDARG00000040635
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNF11ENSGALG00000010539Gallus gallus
 RNF11ENSG00000123091Homo sapiens
 Rnf11ENSMUSG00000028557Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnf11a / ring finger protein 11a / RNF11* / Q9QYK7* / Q9Y3C5* / ring finger protein 11*ENSDARG0000001044276


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000155 somite somite morphology , abnormal
somite fused with somite , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr