ENSDARG00000041735


Danio rerio

Features
Gene ID: ENSDARG00000041735
  
Biological name :tmem237a
  
Synonyms : F1Q930 / tmem237a / transmembrane protein 237a
  
Possible biological names infered from orthology : Q3V0J1 / Q96Q45 / TMEM237 / transmembrane protein 237
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 13714379
Gene end: 13728937
  
Corresponding Affymetrix probe sets: Dr.14315.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000007797
Ensembl peptide - ENSDARP00000122333
Ensembl peptide - ENSDARP00000114451
NCBI entrez gene - 557237     See in Manteia.
RefSeq - NM_001319136
RefSeq Peptide - NP_001306065
swissprot - E9QH50
swissprot - E9QFD7
swissprot - F1Q930
ZFIN ID - ZDB-GENE-070402-3
Ensembl - ENSDARG00000041735
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMEM237ENSGALG00000008381Gallus gallus
 Q96Q45ENSG00000155755Homo sapiens
 Q3V0J1ENSMUSG00000038079Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q66IE4 / tmem237b / transmembrane protein 237b / Q96Q45* / Q3V0J1* / TMEM237* / transmembrane protein 237*ENSDARG0000007424862


Protein motifs (from Interpro)
Interpro ID Name
 IPR029409  Transmembrane protein 237


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0030111 regulation of Wnt signaling pathway ISS
 biological_processGO:0060027 convergent extension involved in gastrulation IGI
 biological_processGO:0060271 cilium assembly ISS
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0035869 ciliary transition zone ISS
 cellular_componentGO:0042995 cell projection IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000135 notochord notochord decreased length , abnormal
notochord kinked , abnormal
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 ZFA:0000155 somite somite increased width , abnormal
somite deformed , abnormal
Show

 ZFA:0000823 rhombomere 5 rhombomere 5 increased width , abnormal
Show

 ZFA:0001094 whole organism whole organism wholly dorsalized , abnormal
whole organism anterior-posterior axis decreased length , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr