ENSDARG00000042120


Danio rerio

Features
Gene ID: ENSDARG00000042120
  
Biological name :si:dkey-97o5.1
  
Synonyms : Q5TYP4 / si:dkey-97o5.1
  
Possible biological names infered from orthology : BC055324 / C1orf112 / chromosome 1 open reading frame 112 / Mus musculus (BC055324), transcript variant 2, mRNA. / Q3TQQ9 / Q9NSG2
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 33994580
Gene end: 34010235
  
Corresponding Affymetrix probe sets: Dr.15473.1.A1_at (Zebrafish Array)   NM_001020659_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000061728
NCBI entrez gene - 553598     See in Manteia.
RefSeq - XM_005160693
RefSeq - NM_001020659
RefSeq Peptide - NP_001018495
swissprot - Q5TYP4
ZFIN ID - ZDB-GENE-030131-3554
Ensembl - ENSDARG00000042120
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 C1orf112ENSGALG00000032743Gallus gallus
 Q9NSG2ENSG00000000460Homo sapiens
 Q3TQQ9ENSMUSG00000041406Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR027902  Protein of unknown function DUF4487


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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