ENSDARG00000042370


Danio rerio

Features
Gene ID: ENSDARG00000042370
  
Biological name :ptafr
  
Synonyms : platelet-activating factor receptor / ptafr
  
Possible biological names infered from orthology : P25105 / Q62035
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 27971144
Gene end: 27976031
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000062129
Ensembl peptide - ENSDARP00000128308
NCBI entrez gene - 100002627     See in Manteia.
RefSeq - XM_001342336
swissprot - E7EZR6
ZFIN ID - ZDB-GENE-131127-236
Ensembl - ENSDARG00000042370
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PTAFRENSGALG00000000783Gallus gallus
 PTAFRENSG00000169403Homo sapiens
 PtafrENSMUSG00000056529Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lpar4 / lysophosphatidic acid receptor 4 / Q8BLG2* / Q99677*ENSDARG0000008982426
p2ry2.1 / purinergic receptor P2Y2, tandem duplicate 1 / P2RY2* / P41231* / purinergic receptor P2Y2*ENSDARG0000009991525
cysltr3 / cysteinyl leukotriene receptor 3ENSDARG0000010176925
cysltr1 / cysteinyl leukotriene receptor 1 / Q99JA4* / Q9Y271*ENSDARG0000005824624
si:ch211-184m13.4ENSDARG0000007952224
p2ry2.3 / purinergic receptor P2Y2, tandem duplicate 3 / P2RY2* / P41231* / purinergic receptor P2Y2*ENSDARG0000010442524
p2ry2.2 / purinergic receptor P2Y2, tandem duplicate 2 / P2RY2* / P41231* / purinergic receptor P2Y2*ENSDARG0000010492724
gpr17 / G protein-coupled receptor 17 / Q13304* / Q6NS65* / Uracil nucleotide/cysteinyl leukotriene receptor *ENSDARG0000006203023
lpar6b / lysophosphatidic acid receptor 6b / LPAR6* / Q8BMC0* / P43657* / lysophosphatidic acid receptor 6*ENSDARG0000006944123
lpar5a / lysophosphatidic acid receptor 5a / LPAR5* / Q9H1C0* / lysophosphatidic acid receptor 5*ENSDARG0000001038422
si:dkey-78k11.9ENSDARG0000003715522
lpar6a / lysophosphatidic acid receptor 6a / LPAR6* / P43657* / lysophosphatidic acid receptor 6*ENSDARG0000006255222
p2ry10 / P2Y receptor family member 10 / Q8BFU7* / O00398* / P2ry10b* / purinergic receptor P2Y, G-protein coupled 10B* / Mus musculus purinergic receptor P2Y, G-protein coupled 10 (P2ry10)...ENSDARG0000006281122
zgc:172079ENSDARG0000007764422
oxgr1a.2 / oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 2 / OXGR1* / Q96P68* / Q6IYF8* / oxoglutarate receptor 1* / 2-oxoglutarate receptor 1 *ENSDARG0000007874322
gpr174 / G protein-coupled receptor 174 / Q3U507* / Q9BXC1*ENSDARG0000007982622
p2ry1 / purinergic receptor P2Y1 / P47900* / P49650* / purinergic receptor P2Y, G-protein coupled 1*ENSDARG0000010528122
gpr183a / G protein-coupled receptor 183a / Q3U6B2* / GPR183* / P32249* / G protein-coupled receptor 183*ENSDARG0000001031721
oxgr1b / oxoglutarate (alpha-ketoglutarate) receptor 1b / OXGR1* / Q96P68* / Q6IYF8* / oxoglutarate receptor 1* / 2-oxoglutarate receptor 1 *ENSDARG0000002980321
oxgr1a.1 / oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 / OXGR1* / Q96P68* / Q6IYF8* / oxoglutarate receptor 1* / 2-oxoglutarate receptor 1 *ENSDARG0000003368421


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR002282  Platelet-activating factor receptor
 IPR017452  GPCR, rhodopsin-like, 7TM


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006935 chemotaxis IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0035589 G-protein coupled purinergic nucleotide receptor signaling pathway IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0004992 platelet activating factor receptor activity IEA
 molecular_functionGO:0045028 G-protein coupled purinergic nucleotide receptor activity IBA


Pathways (from Reactome)
Pathway description
Class A/1 (Rhodopsin-like receptors)
G alpha (q) signalling events
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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