ENSDARG00000042396


Danio rerio

Features
Gene ID: ENSDARG00000042396
  
Biological name :odf3b
  
Synonyms : A3KQA5 / odf3b / outer dense fiber of sperm tails 3B / trim35-30
  
Possible biological names infered from orthology : A8MYP8 / ODF3 / outer dense fiber of sperm tails 3 / Outer dense fiber protein 3 / Outer dense fiber protein 3B / Q5M8M2 / Q920N1 / Q96PU9
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 7611298
Gene end: 7622892
  
Corresponding Affymetrix probe sets: Dr.14748.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000144363
Ensembl peptide - ENSDARP00000062155
NCBI entrez gene - 335524     See in Manteia.
swissprot - Q1L9F9
swissprot - A3KQA5
ZFIN ID - ZDB-GENE-060503-557
ZFIN ID - ZDB-GENE-030131-7464
Ensembl - ENSDARG00000042396
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000033320Gallus gallus
 ODF3ENSG00000177947Homo sapiens
 ODF3BENSG00000177989Homo sapiens
 Odf3ENSMUSG00000025482Mus musculus
 Odf3bENSMUSG00000047394Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:110183 / ODF3L2* / Q3SX64* / Q3TZ65* / outer dense fiber of sperm tails 3 like 2* / Outer dense fiber protein 3-like protein 2 *ENSDARG0000001420941
odf3l2 / outer dense fiber of sperm tails 3-like 2 / Q3SX64*ENSDARG0000002143239


Protein motifs (from Interpro)
Interpro ID Name
 IPR010736  Sperm-tail PG-rich repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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