ENSDARG00000043105


Danio rerio

Features
Gene ID: ENSDARG00000043105
  
Biological name :qtrt1
  
Synonyms : qtrt1 / queuine tRNA-ribosyltransferase 1
  
Possible biological names infered from orthology : Q9BXR0 / Q9JMA2 / queuine tRNA-ribosyltransferase catalytic subunit 1
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 47114328
Gene end: 47128096
  
Corresponding Affymetrix probe sets: Dr.9747.1.A1_at (Zebrafish Array)   NM_201010_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000063286
NCBI entrez gene - 393985     See in Manteia.
RefSeq - NM_201010
RefSeq Peptide - NP_957304
swissprot - F1RDP5
ZFIN ID - ZDB-GENE-040426-1625
Ensembl - ENSDARG00000043105
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 QTRT1ENSG00000213339Homo sapiens
 Qtrt1ENSMUSG00000002825Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
qtrt2 / queuine tRNA-ribosyltransferase accessory subunit 2 / Q9H974*ENSDARG0000001609323


Protein motifs (from Interpro)
Interpro ID Name
 IPR002616  tRNA-guanine(15) transglycosylase-like
 IPR004803  tRNA-guanine transglycosylase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006400 tRNA modification IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0101030 tRNA-guanine transglycosylation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0008479 queuine tRNA-ribosyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0016763 transferase activity, transferring pentosyl groups IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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