ENSDARG00000043198


Danio rerio

Features
Gene ID: ENSDARG00000043198
  
Biological name :si:rp71-1i20.2
  
Synonyms : si:rp71-1i20.2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 6393227
Gene end: 6404910
  
Corresponding Affymetrix probe sets: Dr.1093.1.A1_at (Zebrafish Array)   NM_001013487_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000123926
Ensembl peptide - ENSDARP00000063419
NCBI entrez gene - 554678     See in Manteia.
RefSeq - NM_001013487
RefSeq - XM_009295979
RefSeq Peptide - NP_001013505
swissprot - A8DZ56
ZFIN ID - ZDB-GENE-040724-207
Ensembl - ENSDARG00000043198
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:113298ENSDARG0000007164859
si:ch211-274k16.9ENSDARG0000009591856
zgc:171500ENSDARG0000007155338
si:ch73-213k20.5ENSDARG0000005875337
CT583625.5ENSDARG0000011028837
si:ch211-209l18.4ENSDARG0000009084735
si:rp71-36a1.5ENSDARG0000009088235
zgc:171490ENSDARG0000007164334
si:dkey-19a16.12ENSDARG0000009594034
zgc:172133ENSDARG0000007524833
si:dkey-19a16.7ENSDARG0000007164432
si:rp71-36a1.5ENSDARG0000007725231
FO904898.4ENSDARG0000009086931
si:dkey-19a16.4ENSDARG0000007165730
fgfr1bl / fibroblast growth factor receptor 1b, likeENSDARG0000007502724
FO904898.1ENSDARG0000009016724


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006955 immune response IBA
 cellular_componentGO:0009986 cell surface IBA
 molecular_functionGO:0005102 signaling receptor binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr