ENSDARG00000043242


Danio rerio

Features
Gene ID: ENSDARG00000043242
  
Biological name :si:dkey-222f2.1
  
Synonyms : si:dkey-222f2.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 5727753
Gene end: 5739360
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000063483
NCBI entrez gene - 568321     See in Manteia.
RefSeq - XM_021469525
RefSeq - XM_691644
swissprot - F1RDG4
ZFIN ID - ZDB-GENE-050208-726
Ensembl - ENSDARG00000043242
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
krt4 / keratin 4 / KRT8* / KRT5* / KRT3* / KRT1* / KRT7* / KRT76* / KRT75* / KRT71* / Krt90* / KRT6C* / KRT6B* / KRT6A* / KRT79* / Q9DCV7* / Gm5414* / Gm5478* / P02538* / P04259* / P04264* ...ENSDARG0000001762462
krt8 / Q6NWF6 / keratin 8 / KRT4* / KRT3* / KRT1* / KRT7* / KRT5* / KRT75* / KRT71* / Krt90* / KRT6C* / KRT6B* / KRT6A* / KRT79* / KRT76* / Q9DCV7* / Gm5414* / Gm5478* / P02538* / P04259* /...ENSDARG0000005835862
krt5 / keratin 5 / KRT8* / KRT4* / KRT3* / KRT1* / KRT7* / KRT76* / KRT75* / KRT71* / Krt90* / KRT6C* / KRT6B* / KRT6A* / KRT79* / Q9DCV7* / Gm5414* / Gm5478* / P02538* / P04259* / P04264* ...ENSDARG0000005837162
zgc:158846 / KRT1* / KRT4* / KRT3* / KRT8* / KRT7* / KRT5* / KRT76* / KRT75* / KRT71* / KRT6A* / KRT6C* / Krt90* / KRT6B* / KRT79* / Q3SY84* / Gm5414* / Gm5478* / O95678* / P02538* / P04259...ENSDARG0000005846252


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR003054  Keratin, type II
 IPR018039  Intermediate filament protein, conserved site
 IPR032444  Keratin type II head


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0045095 keratin filament IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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