ENSDARG00000043301


Danio rerio

Features
Gene ID: ENSDARG00000043301
  
Biological name :gtf3c6
  
Synonyms : general transcription factor IIIC, polypeptide 6, alpha / gtf3c6
  
Possible biological names infered from orthology : general transcription factor IIIC subunit 6 / Q969F1 / Q9D8P7 / ral transcription factor 3C polypeptide 6
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 17252487
Gene end: 17253389
  
Corresponding Affymetrix probe sets: Dr.24823.1.A1_at (Zebrafish Array)   NM_200262_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000063571
NCBI entrez gene - 393232     See in Manteia.
RefSeq - NM_200262
RefSeq Peptide - NP_956556
swissprot - F1R3R9
ZFIN ID - ZDB-GENE-040426-1009
Ensembl - ENSDARG00000043301
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GTF3C6ENSGALG00000015044Gallus gallus
 GTF3C6ENSG00000155115Homo sapiens
 Gtf3c6ENSMUSG00000019837Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019481  Transcription factor TFIIIC, tau55-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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