ENSDARG00000043443


Danio rerio

Features
Gene ID: ENSDARG00000043443
  
Biological name :kcnj13
  
Synonyms : kcnj13 / potassium inwardly-rectifying channel, subfamily J, member 13
  
Possible biological names infered from orthology : Inward rectifier potassium channel 13 / O60928 / P86046 / potassium voltage-gated channel subfamily J member 13
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 40217256
Gene end: 40267485
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000063776
Ensembl peptide - ENSDARP00000126942
NCBI entrez gene - 555691     See in Manteia.
swissprot - Q0KIZ7
ZFIN ID - ZDB-GENE-070129-1
Ensembl - ENSDARG00000043443
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KCNJ13ENSGALG00000001490Gallus gallus
 KCNJ13ENSG00000115474Homo sapiens
 Kcnj13ENSMUSG00000079436Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kcnj16 / potassium inwardly-rectifying channel, subfamily J, member 16 / Q9NPI9* / Q9Z307* / Inward rectifier potassium channel 16 * / potassium voltage-gated channel subfamily J member 16*ENSDARG0000004503926


Protein motifs (from Interpro)
Interpro ID Name
 IPR008062  Inward rectifier potassium channel 13
 IPR013518  Potassium channel, inwardly rectifying, Kir, cytoplasmic
 IPR014756  Immunoglobulin E-set
 IPR016449  Potassium channel, inwardly rectifying, Kir


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006813 potassium ion transport IEA
 biological_processGO:0010107 potassium ion import IBA
 biological_processGO:0030318 melanocyte differentiation IMP
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0043473 pigmentation IMP
 biological_processGO:0051876 pigment granule dispersal IMP
 biological_processGO:0051877 pigment granule aggregation in cell center IMP
 biological_processGO:0097324 melanocyte migration IMP
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005242 inward rectifier potassium channel activity IBA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000368 integument integument pigmentation disrupted , abnormal
Show

 ZFA:0001058 caudal fin caudal fin has fewer parts of type melanophore stripe , abnormal
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 ZFA:0001094 whole organism whole organism quality , abnormal
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 ZFA:0001162 anal fin anal fin has fewer parts of type melanophore stripe , abnormal
anal fin melanophore stripe decreased width , abnormal
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 ZFA:0001463 melanophore stripe melanophore stripe decreased amount , abnormal
melanophore stripe irregular spatial pattern , abnormal
melanophore stripe patchy , abnormal
melanophore stripe increased width , abnormal
melanophore stripe increased distance melanophore stripe , abnormal
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 ZFA:0009090 pigment cell pigment cell quality , abnormal
pigment cell irregular spatial pattern , abnormal
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 ZFA:0009091 melanocyte melanocyte spatial pattern , abnormal
melanocyte membrane potential , abnormal
melanocyte confluent with xanthophore , abnormal
Show

 ZFA:0009198 xanthophore xanthophore spatial pattern , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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