ENSDARG00000043559


Danio rerio

Features
Gene ID: ENSDARG00000043559
  
Biological name :gle1
  
Synonyms : gle1 / GLE1 RNA export mediator homolog (yeast)
  
Possible biological names infered from orthology : GLE1, RNA export mediator / Nucleoporin GLE1 / Q53GS7 / Q8R322
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 2543525
Gene end: 2574781
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000104523
Ensembl peptide - ENSDARP00000110644
NCBI entrez gene - 445408     See in Manteia.
RefSeq - NM_001003885
RefSeq - XM_005166747
RefSeq Peptide - NP_001003885
swissprot - B0S5D2
swissprot - B0S5C8
ZFIN ID - ZDB-GENE-040831-4
Ensembl - ENSDARG00000043559
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GLE1ENSGALG00000004738Gallus gallus
 GLE1ENSG00000119392Homo sapiens
 Gle1ENSMUSG00000019715Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR012476  GLE1-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016973 poly(A)+ mRNA export from nucleus IEA
 cellular_componentGO:0005643 nuclear pore IEA


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle cilium movement decreased rate , abnormal
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 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
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 ZFA:0000029 hindbrain hindbrain oligodendrocyte spatial pattern , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000075 spinal cord spinal cord neuronal stem cell apoptotic , abnormal
spinal cord lacks parts or has fewer parts of type secondary motor neuron , abnormal
spinal cord decreased size , abnormal
spinal cord apoptotic , abnormal
spinal cord has fewer parts of type motor neuron , abnormal
spinal cord cell death increased occurrence , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
eye cell death increased occurrence , abnormal
Show

 ZFA:0000112 gut gut hypoplastic , abnormal
gut quality , abnormal
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 ZFA:0000114 heart heart quality , abnormal
heart edematous , abnormal
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 ZFA:0000119 retinal inner nuclear layer retinal inner nuclear layer cell death increased occurrence , abnormal
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 ZFA:0000123 liver liver hypoplastic , abnormal
liver quality , abnormal
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 ZFA:0000144 retinal pigmented epithelium retinal pigmented epithelium cell death increased occurrence , abnormal
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 ZFA:0000175 posterior lateral line nerve posterior lateral line nerve axon decreased diameter , abnormal
posterior lateral line nerve axon lacks parts or has fewer parts of type neuron myelin sheath, abnormal
Show

 ZFA:0000360 heart tube heart tube position , abnormal
Show

 ZFA:0000368 integument integument edematous , abnormal
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 ZFA:0000396 nervous system nervous system quality , abnormal
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 ZFA:0000944 posterior lateral line posterior lateral line anterior region decreased distribution , abnormal
posterior lateral line myelinating Schwann cell absent , abnormal
posterior lateral line myelinating Schwann cell decreased amount , abnormal
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 ZFA:0001094 whole organism whole organism cell death increased occurrence , abnormal
whole organism decreased life span , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
head edematous , abnormal
head cell necrotic , abnormal
head apoptotic , abnormal
head cell death increased occurrence , abnormal
Show

 ZFA:0001161 pectoral fin pectoral fin decreased size , abnormal
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 ZFA:0001273 ventral mandibular arch ventral mandibular arch decreased size , abnormal
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 ZFA:0001289 ciliary marginal zone ciliary marginal zone apoptotic , abnormal
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 ZFA:0001439 anatomical system anatomical system quality , abnormal
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 ZFA:0001460 pharyngeal arch cartilage pharyngeal arch cartilage aplastic , abnormal
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 ZFA:0001470 anterior lateral line anterior lateral line myelinating Schwann cell absent , abnormal
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 ZFA:0001725 immature Schwann cell immature Schwann cell cell proliferation decreased occurrence , abnormal
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 ZFA:0005124 intestinal epithelium intestinal epithelium morphology , abnormal
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 ZFA:0009052 motor neuron motor neuron axon disorganized , abnormal
motor neuron morphology , abnormal
motor neuron branchiness , abnormal
Show

 ZFA:0009153 eurydendroid cell eurydendroid cell absent , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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