ENSDARG00000043982


Danio rerio
bindingtube1microtubule-basedprocessmicrotubulenucleotidegtpaseactivitygtp

Features
Gene ID: ENSDARG00000043982
  
Biological name :tube1
  
Synonyms : tube1 / tubulin, epsilon 1
  
Possible biological names infered from orthology : epsilon-tubulin 1 / Q9D6T1 / Q9UJT0
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 262995
Gene end: 318105
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000126671
swissprot - Q5SNS3
ZFIN ID - ZDB-GENE-040426-1174
Ensembl - ENSDARG00000043982
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000015017Gallus gallus
 TUBE1ENSG00000074935Homo sapiens
 Tube1ENSMUSG00000019845Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tube1 / tubulin, epsilon 1 / Q9D6T1* / Q9UJT0* / epsilon-tubulin 1*ENSDARG00000096620100
tubb4b / tubulin, beta 4B class IVbENSDARG0000000234432
zgc:65894ENSDARG0000001630132
zgc:55461 / P04350* / Q9D6F9* / TUBB4A* / tubulin beta 4A class IVa*ENSDARG0000004172332
tubb1 / tubulin, beta 1 class VI / A2AQ07* / Q9H4B7*ENSDARG0000005306632
tubb2b / tubulin, beta 2b / Q9D6F9* / P04350* / TUBB4A* / tubulin beta 4A class IVa*ENSDARG0000009859132
zgc:153426ENSDARG0000010443632
tubb5 / tubulin, beta 5 / TUBB* / P99024* / P07437* / tubulin beta class I* / tubulin, beta 5 class I*ENSDARG0000003799731
tubb2 / tubulin, beta 2A class IIa / Q9BVA1* / Q9CWF2* / Q13885* / TUBB2A* / TUBB2B* / Q7TMM9* / tubulin beta 2B class IIb*ENSDARG0000003952231
tubb6 / tubulin, beta 6 class V / Q922F4* / Q9BUF5*ENSDARG0000010480130
tubd1 / tubulin, delta 1 / Q9R1K7* / Q9UJT1*ENSDARG0000005821923


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
microtubule-based processmicrotubule-based processmicrotubule-based processmicrotubule-based processmicrotubule-based processmicrotubule-based processmicrotubule-based processmicrotubule-based processmicrotubule-based processmicrotubule-based processmicrotubule-based processmicrotubule-based process
organic cyclic compound bindingheterocyclic compound bindingsmall molecule bindinghydrolase activityion bindingcarbohydrate derivative bindingorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindinghydrolase activityion bindingcarbohydrate derivative bindingorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindinghydrolase activityion bindingcarbohydrate derivative bindingorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindinghydrolase activityion bindingcarbohydrate derivative bindingorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindinghydrolase activityion bindingcarbohydrate derivative bindingorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindinghydrolase activityion bindingcarbohydrate derivative bindingorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindinghydrolase activityion bindingcarbohydrate derivative bindingorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindinghydrolase activityion bindingcarbohydrate derivative bindingorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindinghydrolase activityion bindingcarbohydrate derivative bindingorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindinghydrolase activityion bindingcarbohydrate derivative bindingorganic cyclic compoundorganic cyclic compound bindingheterocyclic compound bheterocyclic compound bindingsmall molecule bindingsmall molecule bindinghydrolase activityhydrolase activityion bindingion bindingcarbohydrate derivativecarbohydrate derivative binding
cellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellcellorganelleorganellesupramolecular complexsupramolecular complex
TypeGO IDTermEv.Code
 biological_processGO:0007017 microtubule-based process IEA
 cellular_componentGO:0005874 microtubule IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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