ENSDARG00000044357


Danio rerio

Features
Gene ID: ENSDARG00000044357
  
Biological name :tbc1d23
  
Synonyms : tbc1d23 / TBC1 domain family, member 23
  
Possible biological names infered from orthology : Q8K0F1 / Q9NUY8
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 28914233
Gene end: 28943056
  
Corresponding Affymetrix probe sets: Dr.15636.1.S1_at (Zebrafish Array)   Dr.15636.2.S1_at (Zebrafish Array)   Dr.25599.1.A1_at (Zebrafish Array)   NM_200487_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000065137
NCBI entrez gene - 798995     See in Manteia.
RefSeq - NM_200487
RefSeq Peptide - NP_956781
swissprot - B7ZUZ8
ZFIN ID - ZDB-GENE-040426-1253
Ensembl - ENSDARG00000044357
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBC1D23ENSGALG00000015273Gallus gallus
 Q9NUY8ENSG00000036054Homo sapiens
 Q8K0F1ENSMUSG00000022749Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR001763  Rhodanese-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain decreased size , abnormal
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 ZFA:0000100 cerebellum cerebellum decreased size , abnormal
cerebellum morphology , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000109 forebrain forebrain morphology , abnormal
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 ZFA:0000110 fourth ventricle fourth ventricle increased size , abnormal
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 ZFA:0001117 post-vent region post-vent region increased curvature , abnormal
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 ZFA:0001707 brainstem brainstem decreased size , abnormal
brainstem morphology , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr