ENSDARG00000044556


Danio rerio

Features
Gene ID: ENSDARG00000044556
  
Biological name :pacs1a
  
Synonyms : pacs1a / phosphofurin acidic cluster sorting protein 1a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 27513859
Gene end: 27555345
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000065419
NCBI entrez gene - 569034     See in Manteia.
RefSeq - NM_001098748
RefSeq Peptide - NP_001092218
swissprot - F1QIP5
ZFIN ID - ZDB-GENE-050208-244
Ensembl - ENSDARG00000044556
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-126j24.1ENSDARG0000009864454
pacs2 / phosphofurin acidic cluster sorting protein 2 / Q3V3Q7* / Q86VP3*ENSDARG0000007818550
LT631684.1ENSDARG0000010832642


Protein motifs (from Interpro)
Interpro ID Name
 IPR019381  Phosphofurin acidic cluster sorting protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0044325 ion channel binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain hydrocephalic , abnormal
Show

 ZFA:0000151 pronephros pronephros cystic , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased length , abnormal
whole organism semi-lethal (sensu genetics) , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr