ENSDARG00000044753


Danio rerio

Features
Gene ID: ENSDARG00000044753
  
Biological name :idh3b
  
Synonyms : idh3b / isocitrate dehydrogenase 3 (NAD+) beta
  
Possible biological names infered from orthology : O43837
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 15733880
Gene end: 15749719
  
Corresponding Affymetrix probe sets: Dr.12046.1.S1_at (Zebrafish Array)   Dr.16243.1.A1_at (Zebrafish Array)   NM_001002157_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000124593
Ensembl peptide - ENSDARP00000156480
NCBI entrez gene - 415247     See in Manteia.
RefSeq - NM_001002157
RefSeq Peptide - NP_001002157
swissprot - F8W2V6
ZFIN ID - ZDB-GENE-040625-174
Ensembl - ENSDARG00000044753
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IDH3BENSG00000101365Homo sapiens
 Idh3bENSMUSG00000027406Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
idh3g / isocitrate dehydrogenase 3 (NAD+) gamma / Q8BPC6* / P51553* / P70404* / 4933405O20Rik* / Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial *ENSDARG0000002364848


Protein motifs (from Interpro)
Interpro ID Name
 IPR004434  Isocitrate dehydrogenase NAD-dependent
 IPR019818  Isocitrate/isopropylmalate dehydrogenase, conserved site
 IPR024084  Isopropylmalate dehydrogenase-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006099 tricarboxylic acid cycle IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0004449 isocitrate dehydrogenase (NAD+) activity IEA
 molecular_functionGO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
 molecular_functionGO:0051287 NAD binding IEA


Pathways (from Reactome)
Pathway description
Citric acid cycle (TCA cycle)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000023648 idh3g / isocitrate dehydrogenase 3 (NAD+) gamma / Q8BPC6* / P51553* / P70404* / 4933405O20Rik* / Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial *  / complex
 ENSDARG00000030278 idh3a / isocitrate dehydrogenase 3 (NAD+) alpha / P50213* / Q9D6R2* / Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial *  / complex






 

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