ENSDARG00000045023


Danio rerio

Features
Gene ID: ENSDARG00000045023
  
Biological name :lhfpl5a
  
Synonyms : lhfpl5a / LHFPL tetraspan subfamily member 5a
  
Possible biological names infered from orthology : LHFPL5 / LHFPL tetraspan subfamily member 5 / LHFPL tetraspan subfamily member 5 protein / Q4KL25 / Q8TAF8
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 2829812
Gene end: 2838699
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000066188
Ensembl peptide - ENSDARP00000156956
NCBI entrez gene - 558325     See in Manteia.
RefSeq - XM_017358406
swissprot - F1Q837
ZFIN ID - ZDB-GENE-110131-8
Ensembl - ENSDARG00000045023
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LHFPL5ENSGALG00000039170Gallus gallus
 LHFPL5ENSG00000197753Homo sapiens
 Lhfpl5ENSMUSG00000062252Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lhfpl5b / LHFPL tetraspan subfamily member 5b / LHFPL5* / Q4KL25* / Q8TAF8* / LHFPL tetraspan subfamily member 5* / LHFPL tetraspan subfamily member 5 protein *ENSDARG0000005645873
lhfpl3 / Q6DHB5 / LHFPL tetraspan subfamily member 3 / Q86UP9* / LHFPL tetraspan subfamily member 3 protein isoform 1 *ENSDARG0000002159564
lhfpl4a / lipoma HMGIC fusion partner-like 4a / LHFPL4* / Q7Z7J7* / LHFPL tetraspan subfamily member 4*ENSDARG0000011181062
lhfpl4b / LHFPL tetraspan subfamily member 4bENSDARG0000007694338
Q6P0C6 / lhfpl2a / LHFPL tetraspan subfamily member 2aENSDARG0000000965322
lhfpl6 / Q5PRC1 / LHFPL tetraspan subfamily member 6 / Lhfp* / LHFPL1* / Q9Y693* / Q80SV1* / Q86WI0* / Q8BM86* / LHFPL tetraspan subfamily member 1* / LHFPL tetraspan subfamily member 6 pro...ENSDARG0000000436321
lhfpl2b / LHFPL tetraspan subfamily member 2b / LHFPL2* / Q6ZUX7* / Q8BGA2* / LHFPL tetraspan subfamily member 2* / LHFPL tetraspan subfamily member 2 protein *ENSDARG0000009815321
LO017714.1 / Lhfp* / Q9Y693* / LHFPL1* / LHFPL6* / Q80SV1* / Q86WI0* / Q8BM86* / LHFPL tetraspan subfamily member 1* / LHFPL tetraspan subfamily member 6* / LHFPL tetraspan subfamily member...ENSDARG0000011510121


Protein motifs (from Interpro)
Interpro ID Name
 IPR019372  Lipoma HMGIC fusion partner-like protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050974 detection of mechanical stimulus involved in sensory perception IMP
 biological_processGO:0061512 protein localization to cilium IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000217 inner ear inner ear hair cell decreased amount , abnormal
inner ear stereocilium bundle disorganized , abnormal
inner ear stereocilium bundle splayed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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