ENSDARG00000045092


Danio rerio

Features
Gene ID: ENSDARG00000045092
  
Biological name :cdk5rap3
  
Synonyms : cdk5rap3 / CDK5 regulatory subunit associated protein 3
  
Possible biological names infered from orthology : Q96JB5 / Q99LM2
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 28825735
Gene end: 28837752
  
Corresponding Affymetrix probe sets: Dr.3719.1.A1_at (Zebrafish Array)   NM_001002105_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000114762
Ensembl peptide - ENSDARP00000145274
NCBI entrez gene - 415195     See in Manteia.
RefSeq - NM_001002105
RefSeq Peptide - NP_001002105
swissprot - F1Q5I0
ZFIN ID - ZDB-GENE-040625-90
Ensembl - ENSDARG00000045092
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDK5RAP3ENSGALG00000036452Gallus gallus
 Q96JB5ENSG00000108465Homo sapiens
 Q99LM2ENSMUSG00000018669Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008491  CDK5 regulatory subunit-associated protein 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IBA
 biological_processGO:0007346 regulation of mitotic cell cycle IMP
 biological_processGO:0055113 epiboly involved in gastrulation with mouth forming second IMP
 biological_processGO:0070586 cell-cell adhesion involved in gastrulation IMP
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism morphology , abnormal
whole organism viability , abnormal
whole organism hypoplastic , abnormal
whole organism anterior-posterior axis decreased length , abnormal
whole organism apoptotic , abnormal
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 ZFA:0009177 blastoderm cell blastoderm cell increased size , abnormal
blastoderm cell cellular adhesivity blastoderm cell , abnormal
blastoderm cell decreased amount , abnormal
blastoderm cell nucleus increased size , abnormal
blastoderm cell nucleus decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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