ENSDARG00000045399


Danio rerio

Features
Gene ID: ENSDARG00000045399
  
Biological name :cct5
  
Synonyms : cct5 / chaperonin containing TCP1, subunit 5 (epsilon)
  
Possible biological names infered from orthology : chaperonin containing TCP1 subunit 5 / P48643 / P80316 / T-complex protein 1 subunit epsilon
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 16905188
Gene end: 16912897
  
Corresponding Affymetrix probe sets: Dr.1691.3.S1_at (Zebrafish Array)   NM_212613_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000066759
NCBI entrez gene - 322258     See in Manteia.
RefSeq - NM_212613
RefSeq Peptide - NP_997778
swissprot - Q6NVI6
ZFIN ID - ZDB-GENE-030131-977
Ensembl - ENSDARG00000045399
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCT5ENSGALG00000013041Gallus gallus
 CCT5ENSG00000150753Homo sapiens
 Cct5ENSMUSG00000022234Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002194  Chaperonin TCP-1, conserved site
 IPR002423  Chaperonin Cpn60/TCP-1 family
 IPR012718  T-complex protein 1, epsilon subunit
 IPR017998  Chaperone tailless complex polypeptide 1 (TCP-1)
 IPR027409  GroEL-like apical domain superfamily
 IPR027413  GroEL-like equatorial domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006457 protein folding IEA
 biological_processGO:0006458 "de novo" protein folding IBA
 biological_processGO:0061077 chaperone-mediated protein folding IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005832 chaperonin-containing T-complex IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0044183 protein binding involved in protein folding IBA
 molecular_functionGO:0051082 unfolded protein binding IEA


Pathways (from Reactome)
Pathway description
Association of TriC/CCT with target proteins during biosynthesis
Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000084 yolk yolk circular , abnormal
yolk quality , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut hypoplastic , abnormal
gut quality , abnormal
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 ZFA:0000114 heart heart quality , abnormal
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 ZFA:0000123 liver liver hypoplastic , abnormal
liver quality , abnormal
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 ZFA:0000396 nervous system nervous system quality , abnormal
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 ZFA:0001114 head head circular , abnormal
head decreased size , abnormal
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 ZFA:0001439 anatomical system anatomical system quality , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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